See also my Google Scholar profile .
2024
Vince Buffalo (2024) GRanges: A Rust Library for Genomic Range Data. Bioinformatics [code]
Vince Buffalo (2024) Beings, Beanbags, or Bits: How Should We Look at Life? BioScience
Vince Buffalo and Andrew Kern (2024) A Quantitative Genetic Model of Background Selection in Humans. PLoS Genetics [code]
Vince Buffalo (2024) SciDataFlow: A Tool for Improving the Flow of Data through Science. Bioinformatics [code]
2022
Reid Brennan, James deMayo, Hans Dam, Michael Finiguerra, Hannes Baumann, Vince Buffalo, Melissa Pespeni (2022) Experimental evolution reveals the synergistic genomic mechanisms of adaptation to ocean warming and acidification in a marine copepod. PNAS
2021
Vince Buffalo (2021) Quantifying the relationship between genetic diversity and population size suggests natural selection cannot explain Lewontin’s Paradox. eLife [preprint] [code] [blog post]
2020
Vince Buffalo and Graham Coop (2020) Estimating the genome-wide contribution of selection to temporal allele frequency change. PNAS [preprint] [code] [blog post]
2019
Vince Buffalo and Graham Coop (2019) The Linked Selection Signature of Rapid Adaptation in Temporal Genomic Data. Genetics [preprint] [code] [blog post]
2017
Robert Bukowski, Xiaosen Guo, Yanli Lu, Cheng Zou, Bing He, Zhengqin Rong, Bo Wang, Dawen Xu, Bicheng Yang, Chuanxiao Xie, Longjiang Fan, Shibin Gao, Xun Xu, Gengyun Zhang, Yingrui Li, Yinping Jiao, John Doebley, Jeffrey Ross-Ibarra, Vince Buffalo, Edward S Buckler, Yunbi Xu, Jinsheng Lai, Doreen Ware, Qi Sun (2017) Construction of the third generation Zea mays haplotype map. GigaScience
2016
Vince Buffalo, Stephen M. Mount, Graham Coop (2016) A Genealogical Look at Shared Ancestry on the X Chromosome. Genetics [preprint] [code] [blog post]
2014
Stephen Pearce, Facundo Tabbita, Dario Cantu, Vince Buffalo, Raz Avni, Hans Vazquez-Gross, Rongrong Zhao, Christopher J Conley, Assaf Distelfeld, Jorge Dubcovksy (2014) Regulation of Zn and Fe transporters by the GPC1 gene during early wheat monocarpic senescence. BMC Plant Biology
2013
Ksenia V Krasileva, Vince Buffalo, Paul Bailey, Stephen Pearce, Sarah Ayling, Facundo Tabbita, Marcelo Soria, Shichen Wang, Eduard Akhunov, Cristobal Uauy, Jorge Dubcovsky (2013) Separating homeologs by phasing in the tetraploid wheat transcriptome. Genome Biology
Sree Kanthaswamy, Jillian Ng, Cody T Ross, Jessica Satkoski Trask, David Glenn Smith, Vince S Buffalo, Joseph N Fass, Dawei Lin (2013) Identifying human-rhesus macaque gene orthologs using heterospecific SNP probes. Genomics
2012
Federico Martinelli, Sandra L Uratsu, Ute Albrecht, Russell L Reagan, My L Phu, Monica Britton, Vincent Buffalo, et al. (2012) Transcriptome profiling of citrus fruit response to huanglongbing disease. PLoS One
Shyh‐Jen Shih, Joseph Fass, Vincent Buffalo, Dawei Lin, Sheetal P Singh, Manuel O Diaz, Andrew T Vaughan (2012) Multiple clonal MLL fusions in a patient receiving CHOP‐based chemotherapy. British Journal of Haematology
2011
Dent Earl, Keith Bradnam, John St John, Aaron Darling, Dawei Lin, Joseph Fass, Hung On Ken Yu, Vince Buffalo, et al. (2011) Assemblathon 1: a competitive assessment of de novo short read assembly methods. Genome Research